Tag: core facilities and competence centres

  • Single-cell data science enables recent breakthroughs in cancer research

    As possibilities of data acquisition to study cancer widen, so do the methods used to investigate and reveal the nature of this complex disease. Recent illustrations of this are the advances in the field of immunotherapy led by clinical researchers...

  • Andreas Ziegler's group

    What we do Cardio-CARE is involved in the pre-processing, quality control and data analysis of high throughput Omics data. Other core competencies include the planning, conduct, and analysis of clinical studies, such as randomized controlled...

  • Raphael Gottardo's group

    What we do The Translational Data Science (TDS) group focuses on developing novel computational tools, statistical methods and machine learning algorithms for the analysis of high-throughput and high-dimensional datasets generated by novel assay...

  • SwissBioData ecosystem: boosting Switzerland's data-intensive research in life sciences

    This is the summary description of this new research infrastructure, submitted to the SERI Research Infrastructure Roadmap 2023. Switzerland is at the forefront of the data revolution in the life sciences. To support this transformation, Swiss...

  • Swiss-Prot

    Focus on the group's mission The Swiss-Prot team excels in the art of generating machine-readable knowledge of biology from the ever growing body of scientific publications. It is harnessing the power of deep learning to accelerate literature...

  • SwissBioData: A proposal to boost data-driven discoveries in biology

    Discover the SwissBioData ecosystem, a proposal by the SIB Swiss Institute of Bioinformatics and 13 Swiss institutions, which aims at enabling next-generation data-driven research to boost Switzerland’s capacity to convert biological and biomedical...

  • Joining a European consortium to improve psoriatic arthritis diagnostic and treatment

    European research organisations, pharmaceutical companies, SME’s and patient organisations have joined forces as partners to develop innovative personalised treatment options for people affected by psoriatic arthritis. SIB is delivering core data...

  • Frédéric Schütz's group

    What we do The Biostatistics platform of the Faculty of Biology and Medicine at UNIL acts as a main entry point for questions related to biostatistics and data analysis. The platform delivers services which cover the entire scientific process...

  • Vital-IT

    Focus on the group's mission The Vital-IT team provides bioinformatics collaborative support to life science projects in Switzerland and abroad through collaborations with academic and industry partners. Thanks to its diverse expertise in...

  • Vital-IT: Key activities

    Data management We organize, clean & control the quality of your datasets for subsequent analysis. In addition, we can process, transform and align your datasets to existing standards and make them available as a database. We can propose...

  • Christian Panse's group

    What we do The responsibility of the proteome informatics at the FGCZ is to evaluate and provide services to the mass spectrometry scientists at our center, ranging from sample annotation, data archiving, processing, analysis, visualization up to...

  • Joining EU-supported research consortium to improve obesity treatment

    SIB is joining the consortium ‘SOPHIA’ (Stratification of Obese Phenotypes to Optimize Future Obesity Therapy), which aims to improve risk assessment of complications of obesity and predict treatment response for people with obesity.

  • Compound with anti-aging effects passes human trial

    A dietary supplementation with Urolithin A, a pomegranate metabolite, could help slow down certain aging processes by improving mitochondrial and cellular health in humans

  • Core-IT: bringing together SIB’s expertise in information security, quality assurance and computational infrastructure

    A new Internal Group, Core-IT, is now bringing SIB’s existing IT-related expertise under one roof, with a specific focus on data protection, quality assurance and information security. Together with the recognized excellence of Vital-IT in...

  • A national infrastructure network to enable secure biomedical data processing: the BioMedIT project

    Today, we present an overview of the BioMedIT project, coordinated by SIB’s Personalized Health Informatics Group, as the first of a series of articles on SIB’s role in the development of a personalized health research infrastructure in...

  • SIB is part of a European project to improve data sharing and reuse in the life sciences

    SIB is lending its expertise in data management to the FAIRplus project, aiming to increase the discovery, accessibility and reusability of data from selected projects funded by the European Innovative Medicines Initiative (IMI), as well as...

  • SIB is shaping the future of its pioneer bioinformatics core facility

    Fifteen years after its creation, Vital-IT – one of SIB’s largest groups and Switzerland’s earliest bioinformatics core facility – continues to evolve. Find out how the Group is consolidating its position as the reference in bioinformatics for...

  • September Virtual Seminar by Rostyk Kuzyakiv: an interview

    IPortal, taming biomedical dataData, like money, seems to be driving the world these days. Data-producing technology has evolved so fast in the past few decades that it has created – and continues to do so – huge amounts of data that, like a very...

  • SIB strengthens its capacities in data security and developments for the health sector

    The start of a new academic year is always a good time to engage in strategic thinking. What are the major themes for SIB's development? Where will SIB be adding value in the years to come? Following the directions set out in SIB's Roadmap, over...

  • Our latest video: ‘Swiss Bioinformatics: more than data’

    Discover the spirit behind Switzerland’s vibrant community of scientists dedicated to making sense out of biological data...

  • SIB Days 2018: Swiss Bioinformatics connected

    Hundreds of SIB Members from across Switzerland came to Biel/Bienne on 26 June to attend the SIB Days – our 2-day internal conference and a unique opportunity for the bioinformatics community to connect.

  • Daniel Stekhoven's group

    What we do We are the NEXUS Personalized Health Technologies at the ETH Zurich. Our unit offers highly customizable bioinformatics, biostatistics and software engineering services for projects in the field of biomedical research and development....

  • Torsten Schwede - Thierry Sengstag's group

    What we do sciCORE is a center of competence in scientific computing located at the University of Basel. Over 240 research groups and facilities in the fields of bioinformatics, computational chemistry, physics, biology, medicine, and economics...

  • Bernd Rinn's group

    What we do SIS is an interdisciplinary bioinformatics and scientific IT support group which builds up computational tools. These tools range from lab databases to reusable framework components that enable and support both data analysis and data...

  • Michael Stadler's group

    What we do We study gene regulation through the analysis and modelling of genome-wide datasets. We collaborate closely with experimental researchers on various biological topics, including cancer progression, chromatin biology and cellular...

  • Marcel Riedi's group

    What we do In the Science IT (S3IT) unit, we provide support for science in general, and for life science and medicine in particular. S3IT serves as a partner for both local and national projects to enable competitive research with the advanced...

  • Hubert Rehrauer's group

    What we do We are dedicated to the processing, analysis and interpretation of next-generation sequencing data. We interact closely with research groups, and provide tailored comprehensive bioinformatics solutions. Additionally, we provide standard...

  • Robert Ivanek's group

    What we do Our group is located in the Department of Biomedicine (DBM) at the University of Basel. We collaborate with scientists from DBM on projects covering a broad spectrum of research topics, from cellular differentiation and evolutionary...

  • Laurent Falquet's group

    What we do In the Bioinformatics Unravelling Group of the University of Fribourg (BUGFri), we support life science researchers by providing expertise in data analysis of next-generation sequencing experiments, or any large-scale biological...

  • Luciano Cascione's group

    What we do The Bioinformatics Core Unit (BCU) supports the research groups at the Institute of Oncology Research (IOR) with computational and statistical services. We focus our research interests on the genetics and biology of cancer with a major...

  • Rémy Bruggmann's group

    What we do In the Interfaculty Bioinformatics Unit of the University of Bern (IBU), we provide services and expertise to assist researchers of the three “Life-Science” Faculties and Insel hospital in data analysis and project planning for...

  • Michael Baudis's group

    What we do The Computational Oncogenomics Group works on the computational analysis of structural genome variations in cancer, centred around our arrayMap and Progenetix resources of curated molecular-cytogenetic and sequencing data.Specific...

  • Bioinformatics, a Swiss pride - 20 years of service to the life sciences and health

    Whether we are retracing the history of our ancestors, designing new drugs or understanding what gives Swiss Gruyère its unique flavour, bioinformatics has become an essential discipline.

  • Our annual activity report, the SIB Profile 2018, is out

    The new edition of the SIB Profile celebrates the 20 years of the Institute (1998-2018).

  • "Institutions like SIB play a key role in supporting our country's leading position"

    At the occasion of SIB's 20th birthday, we asked Mauro Dell'Ambrogio, State Secretary for Education, Research and Innovation (SERI) what has made SIB eligible for federal funding over the past years, and how was Switzerland positioned...

  • SIB 20 years on the cover of SERI NEWS

    The cover of the SERI News' March issue (the State Secretariat for Education, Research and Innovation's magazine) is dedicated to SIB, a research infrastructure of national importance, at the occasion of its 20th anniversary.

  • The quick-change artist strategy of a fungus that causes pneumonia

    A study led by a team of researchers from the Institute of Microbiology of CHUV-UNIL and SIB Swiss Institute of Bioinformatics reveals the mechanisms of antigenic variation used by the pathogen Pneumocystis jirovecii to escape the human immune...

  • SourceData is making data discoverable

    A push for a paradigm change in scientific publication. Bringing to the surface information buried in the figures of scientific papers: this is the purpose of SourceData, an open-access platform developed by EMBO in collaboration with the SIB Swiss...

  • A look back on the 13th edition of [BC]2

    Last week, the 13th edition of the Basel Computational Biology Conference, co-organized by SIB Swiss Institute of Bioinformatics and the Biozentrum University of Basel, gathered over 500 participants from all over the globe. Among them,...

  • SIB Group Leader Prof. Xenarios is among the 100 distinguished personalities in Western Switzerland

    Entrepreneurs, Scientists, Journalists, Artists... Each year, the Forum des 100 lists and brings together 100 personalities who contribute to the dynamism and spirit of innovation of Western Switzerland.Prof. Ioannis Xenarios is among the laureates...

  • The new SIB Profile is out

    The last year has been full of developments for SIB, from biocuration, with SIB hosting the 9th International Biocuration Conference, to several projects in personalized health and many more scientific advances...